Reference: Bagby, S., Tong, K.I., Liu, D., Alattia, J.-R. and Ikura, M. The button test: a small scale method using microdialysis cells for assessing protein solubility at concentrations suitable for NMR. J. Biomol. NMR 10:279-282. PROCEDURE FOR SETTING UP THE BUTTON TEST 1. The protein sample was first exchanged into a buffer system of lower ionic strength than the test buffer systems such that an osmotic gradient was formed from the test buffer side to the sample side. In our screening of solution conditions with carboxy-terminal core domain (TFIIBc) of human TFIIB, for example, we first exchanged the protein into distilled, deionised water containing 7.5 mM dithiothreitol (DDT). The protein was subsequently concentrated to 1 mM or higher in order to simulate conditions in an NMR sample. An initial screen using protein at lower concentration might be informative for particularly troublesome systems. 2. A standard piece of dialysis membrane (for example, Spectra/Por molecular porous membrane from Spectrum, 6000 - 8000 molecular weight cut-off) was prepared according to the manufacturer's instructions. 3. The wet dialysis membrane was cut into one inch squares and these pieces were kept moist by placing them between wet Kimwipes. 4. Using a micro pipette tip (for example, Bio-Rad tips for protein electrophoresis, catalogue number 223-9915), 5 uL of concentrated protein sample was pipetted into the central well on the top surface of the microdialysis cell (Fig. 1). A circular motion was used to avoid air bubble formation in the protein solution. 5. The membrane was secured with a rubber O-ring which fits in the groove running around the circumference of the microdialysis cell. 6. The microdialysis cell was submerged in 5 mL of test solution contained, for example, within a scintillation vial. In the case of the complex between TBP core domain and residues 11-77 of TAFII230, the test solutions were pre-cooled to 4C and then kept at 4C for 2-4 hours after submersion of the microdialysis cell to allow equilibration before transferring to a higher temperature environment. 7. For the TFIIBc screen, the test samples were placed in a temperature- controlled environment at 25C. Each day, the clarity of the samples was monitored using the naked eye and/or a standard dissecting microscope. The effect of temperature on solubility can also be investigated by placing test samples with the same solution conditions at different temperatures. 8. In order to confirm that any precipitation, discoloration or fibre formation is dependent on the presence of protein, microdialysis cells were also set up containing buffer solutions with no protein. 9. Microdialysis cells can be obtained from: Hampton Research, 25431 Cabot Road, Suite 205 Laguna Hills, CA 92653-5527 U.S.A. phone (714) 699-1040 fax (714) 586-1453 http://www.hamptonresearch.com The same company also makes O-ring applicators which facilitate the process of securing the dialysis membrane.